relion.protocols.protocol_reconstruct module

class relion.protocols.protocol_reconstruct.ProtRelionReconstruct(**kwargs)[source]

Bases: pwem.protocols.protocol_3d.ProtReconstruct3D

This protocol reconstructs a volume using Relion.

Reconstruct a volume from a given set of particles. The alignment parameters will be converted to a Relion star file and used as direction projections to reconstruct.

convertInputStep()[source]

Create the input file in STAR format as expected by Relion. If the input particles comes from Relion, just link the file.

createOutputStep()[source]
reconstructStep(params)[source]