pwem package

Subpackages

Module contents

This modules contains classes related with EM

class pwem.Config[source]

Bases: pyworkflow.config.Config

CHIMERA_HOME = '/home/yunior/Yunior/Projects/Buildbot/buildbot/worker/devel/scipion/software/em/chimerax-1.1'
CUDA_BIN = '/usr/local/cuda/bin'
CUDA_LIB = '/usr/local/cuda/lib64'
EM_ROOT = '/home/yunior/Yunior/Projects/Buildbot/buildbot/worker/devel/scipion/software/em'
JAVA_HOME = ''
JAVA_MAX_MEMORY = '2'
MPI_BINDIR = '/usr/lib64/mpi/gcc/openmpi/bin'
MPI_LIBDIR = '/usr/lib64/mpi/gcc/openmpi/lib'
XMIPP_HOME = '/home/yunior/Yunior/Projects/Buildbot/buildbot/worker/devel/scipion/software/em/xmipp'
class pwem.Domain[source]

Bases: pyworkflow.plugin.Domain

class pwem.Plugin[source]

Bases: pyworkflow.plugin.Plugin

classmethod defineBinaries(env)[source]

Define required binaries in the given Environment.

classmethod defineBinariesMaxit(default, env)[source]
classmethod getMaxitBin()[source]
classmethod getMaxitHome()[source]