imod.protocols.protocol_etomo module

class imod.protocols.protocol_etomo.ProtImodEtomo(**kwargs)[source]

Bases: pwem.protocols.protocol.EMProtocol, tomo.protocols.protocol_base.ProtTomoBase

Simple wrapper around etomo to manually reconstruct a Tomogram.

More info:
https://bio3d.colorado.edu/imod/doc/etomoTutorial.html
convertInputStep()[source]
createOutputStep()[source]
getPixSizeFromDimensions(outputDim)[source]
runEtomoStep()[source]