deepfinder package

Module contents

class deepfinder.Plugin[source]

Bases: pwem.Plugin

classmethod addDeepFinderPackage(env, version)[source]
classmethod defineBinaries(env)[source]

Define required binaries in the given Environment.

classmethod getDeepFinderEnvActivation()[source]
classmethod getDeepFinderProgram(program)[source]
classmethod getDependencies()[source]
classmethod getEnviron()[source]

Setup the environment variables needed to launch programs.

classmethod runDeepFinder(protocol, program, args, cwd=None)[source]